CDS

Accession Number TCMCG016C25102
gbkey CDS
Protein Id OMO56410.1
Location join(1080..1307,1401..1562,1749..1838,1939..2067,2341..2441,2718..2832,3017..3148,3316..3381,3599..3778,4012..4107,4448..4585,4826..4908,5131..5168,5260..5474,5588..5677)
Organism Corchorus capsularis
locus_tag CCACVL1_26567

Protein

Length 620aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01014505.1
Definition hypothetical protein CCACVL1_26567 [Corchorus capsularis]
Locus_tag CCACVL1_26567

EGGNOG-MAPPER Annotation

COG_category A
Description DEAD-box ATP-dependent RNA helicase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14810        [VIEW IN KEGG]
EC 3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010501        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTAAAAAGAATAAACAGAGGCCTTCAGAAGACCCCAAACCTAGCCAAGAAGAAGAAGAAATAAAGCAAGAAGAAAAACAAAAGGAAGAAGATGCAGCAGAAGAGGAAGAAGAAGAGAAAAGCTTCGAAGAATTAGGTCTCGACCATCGTTTAATCCGCGCCCTTCTAAAGAAAGGCGTCGACAAGCCTTTTCCAATTCAACAGTCCGCAATTCCTTTAATTCTACAAGGCAAAGACGTGGTAGCTCAAGCCAGAACCGGCACTGGTAAAACCTTTGCCTATCTTCTCCCTTTGCTTCAGAAGCTGTTTCCACTTGATTCTGGCTCCAAGGCTAGGCTTGCTCCAGCTGGGTTCATCCTCGTTCCTTCTCGTGAATTATGTCAACAGGTTTATAAAGAAGCCCTTTCATTGATTGAGTTATGTAGAGTTCAGTTGAAAATCGTGCAGTTGACTAGTGGCATGAAAACTTCCGATTTGCGAGCTGCATTGGCAGGGCCTCCAGATATCTTGGTAACAACACCAAAGTGCATAAGGGATTGCTTGTCTAATGGATTACTTCAGCCAGCTTCCATCCGTGAATCACTTGAAATTGTTGTCCTTGATGAGGCAGATCTTTTATTGCAATTTGGCTTTGGTGATGATCTTAAAGCTCTTACGCCTGTTATTCCTAGACGTTGCCAATGCCTTCTGATGTCTGCCACCTCAAGCCCTGATGTTGACCAACTTAAGAAGCAAATTTTGCACACTCCAGTCATTTTGACGTTGTCAGAGGTAGAAGACGTCAAGGATGAGGTTATTTCAAAAAATGTTCAACAATTTTGGATTTCGTGCAGTGCAAGTGATAAGCTACTTTATTGTCTTGCTCTCCTGAAGTTAGAGCTGGTACTGAAGAAAATTTTGATTTTCACTAATACTATTGATGCTGGTTTCAGATTGAAACTATTCTTTGAAAAGTTTGGAATCAAGTCTGCCATCTTGAATGCTGAGTTGCCCCAGAACTCTCGTCTTCACATCCTGGAGGAATTCAATGCTGGGCTTTTTGATTATTTGATTGCGACTGATGACATCCAAACAAAAGAGAAGGAACAAGCCAATGGGGACAAACATGTAGACTCAAGGAAGTCCAGAAAGCATTCTAAGGCGAAGCTGGACTCTGAGTTTGGCGTTGTAAGGGGAATCGACTTCAAAAACGTGCACACGGTTATAAACTTCGATATGCCTTCAACTGCTACAGGATATGTTCATCGAATTGGGCGCACAGGAAGAGCATACAGTGCCGGTGCTTCTGTCTCTCTTGTTTCTCCAGATGAGATGGAAATATTTGAAGAAATTAAATCATTATTGGGTGATGAAGAAGAAGGTGACACTAATATTATTGCGCCATTTTCATTATTGACCAAGGATGCAGTGGAGTCCTTACGATATAGGGCCGAGGATGTAGCAAGGAGTGTGACGAAAATTGCTGTCAGAGAATCTCGAGCTCAGGATTTAAGGAATGAAATTCTCAACTCTGAAAAGTTGAAGGCTCATTTTGAAGTAAACCCAAGAGATCTAGATTTACTGAAGCATGACAAGGTTCTGAGCAAGGGCCCCGCTGCACCTCATCTTCGCGACGTTCCTGACTACCTATTGGACCAGAAGACACGTGATGCCAGTAAAATGGTAAAACTTACTAGAGCTGCAATGGGAGATGGTAAATCCAGTCGTCGCCAAGGATCCAAGAGAAAATTCAGGAAAAACAGAGATCCTCTCAAGACTTTCTCAGCTGAGGGACCAAAGAGAGGTCGCAAAGATGGTATAAAGGGAGAGGGGAAAGGCACAGATTTTACCAATAACAGCAAAAAGCAAAAATCCGTATGA
Protein:  
MAKKNKQRPSEDPKPSQEEEEIKQEEKQKEEDAAEEEEEEKSFEELGLDHRLIRALLKKGVDKPFPIQQSAIPLILQGKDVVAQARTGTGKTFAYLLPLLQKLFPLDSGSKARLAPAGFILVPSRELCQQVYKEALSLIELCRVQLKIVQLTSGMKTSDLRAALAGPPDILVTTPKCIRDCLSNGLLQPASIRESLEIVVLDEADLLLQFGFGDDLKALTPVIPRRCQCLLMSATSSPDVDQLKKQILHTPVILTLSEVEDVKDEVISKNVQQFWISCSASDKLLYCLALLKLELVLKKILIFTNTIDAGFRLKLFFEKFGIKSAILNAELPQNSRLHILEEFNAGLFDYLIATDDIQTKEKEQANGDKHVDSRKSRKHSKAKLDSEFGVVRGIDFKNVHTVINFDMPSTATGYVHRIGRTGRAYSAGASVSLVSPDEMEIFEEIKSLLGDEEEGDTNIIAPFSLLTKDAVESLRYRAEDVARSVTKIAVRESRAQDLRNEILNSEKLKAHFEVNPRDLDLLKHDKVLSKGPAAPHLRDVPDYLLDQKTRDASKMVKLTRAAMGDGKSSRRQGSKRKFRKNRDPLKTFSAEGPKRGRKDGIKGEGKGTDFTNNSKKQKSV